Wiki Commands Reference

All commands used to operate, maintain, and serve the Dengue Literature Review Wiki.

Curator Commands (say to Claude)

These are spoken commands that trigger defined workflows in CLAUDE.md.

Command	What it does
`ingest [filename]`	Reads a PDF from `raw/`, discusses key takeaways, creates source + all linked pages, fetches citation counts
`lint` or `health check`	Scans all pages for broken links, orphans, thin pages, missing connections, contradictions
`update web`	Syncs wiki → Quartz content folder and rebuilds the static site
`wrap up` or `that's all`	Updates `state.md`, index, and log before ending the session
`query [question]`	Answers a question by synthesising across wiki pages; may suggest saving the answer as an analysis page
`add a new category for [X]`	Creates a new subfolder axis under `wiki/` and updates CLAUDE.md
`add a notable finding`	Appends a flagged finding directly to `Notable Findings.md`

Run from the webforshare/ folder.

Sync wiki files and rebuild the site (one command):

.\sync-and-build.ps1

Build only (without re-syncing):

npx quartz build

Serves the site locally with live-rebuild on file changes:

npx quartz build --serve

Install Node.js (if not already installed):

winget install OpenJS.NodeJS.LTS

Then restart your terminal, and install Quartz dependencies from the webforshare/ folder:

npm install

Path	Purpose
`dengue-wiki/wiki/`	Source markdown files (edit here)
`webforshare/content/`	Synced copy for Quartz (do not edit directly)
`webforshare/public/`	Built static site (upload this to host)
`webforshare/sync-and-build.ps1`	Sync + build script
`webforshare/quartz.config.ts`	Site title, baseUrl, theme settings